Archaea: Definition, Characteristics & Examples

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  • 0:05 The Tree of Life
  • 1:24 Definition of Archaea
  • 3:18 Hyperthermophiles
  • 3:55 Extreme Halophiles
  • 5:17 Thermoacidophiles
  • 5:52 Diverse Metabolism
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Lesson Transcript
Instructor: Angela Hartsock

Angela has taught college Microbiology and has a doctoral degree in Microbiology.

There is an entire domain of life that is made up of single-celled organisms without nuclei. We're not referring to the Bacteria domain, however. In this lesson, we will examine the main characteristics of the least commonly known domain, the Archaea.

The Tree of Life

Phylogenetic tree of life
Tree of Life

Take a look at this phylogenetic tree of life. This is a simplified version of the evolution of life on Earth. The black line at the bottom of the screen represents the universal ancestor of all organisms. As you move up the trunk of the tree and into the branches, time moves forward. Each fork in the tree represents a point in evolutionary time where two groups of organisms became distinct. Branches that are close to one another are more closely related to one another than to more distant branches.

Look at the left major branch labeled 'Bacteria.' I'm sure you're familiar with bacteria and have at least heard of a couple of these purple branches. For example, the iconic E. coli is part of the branch labeled 'Proteobacteria.' Now look at the major branch farthest to the right. 'Eukarya' might be a new addition to your vocabulary, but I'm sure you know what most of these branches represent. This side of the tree holds all protozoa, fungi, plants, and animals, including you.

But what about that red group in the middle: the Archaea? The names with those branches are probably all foreign to you. So let's take a closer look and find out just what the Archaea are all about.

Definition of Archaea

If I had to succinctly define the Archaea, I would probably say that it is a diverse phylogenetic domain of prokaryotes, distinct from Bacteria and Eukarya, that includes many extremophiles.

I'm sure that sounds complicated and a bit unhelpful but, by the end of this lesson, that definition will make more sense. Let's start breaking it down by looking at some of the characteristics of Archaea.

Looking at the phylogenetic tree again, you can see that the Archaea domain is on the right, next to the Eukarya branch. This means that despite the Archaea being prokaryotic and unicellular, like bacteria, they are genetically closer to the Eukarya. This statement can be a little deceptive, however. Scientists that examine the genomes of the Archaea have found that they are quite different than either Bacteria or Eukarya. In fact, there are many genes found only in Archaea that have no known function. There could be very novel biological and biochemical processes going on in this group that greatly expand the limits of what is considered biologically possible.

Many Archaea are extremophiles, providing some clues to the function of some of those unique genes. An extremophile is an organism that has evolved to thrive under chemical or physical extremes. So an extremophile is an organism that loves extreme chemical or physical conditions. These extremes can include very high or low temperatures, the ends of the pH spectrum, or solutions with high salt content.

Undoubtedly, some of the novel genes found in Archaea are responsible for their ability to survive in crazy environments. Now, not all Archaea are extremophiles; some are perfectly happy at normal environmental conditions like those found in soil, lakes, and oceans. But let's talk about a few of the extremophile groups.


Hyperthermophiles are organisms that grow best at temperatures above 80 degrees Celsius. The Archaea Pyrolobus fumarii thrives in incredibly deep water at the bottom of the ocean in hydrothermal vent chimneys that can be well over the boiling point of water. Pyrolobus can actively grow at 113 degrees Celsius and can survive in an autoclave, a device that uses heat and pressure to sterilize equipment, at 121 degrees Celsius for an hour. These are conditions that even the toughest bacterial endospores can't survive.

Extreme Halophiles

Extreme halophiles are organisms that require salt for growth and can survive in high-salt environments. These Archaea grow best between 12 and 23% salt but can survive in a saturated salt solution of 32%. As a comparison, seawater is only 3.5% salt and most bacteria are unable to grow in seawater because it is too salty. The Great Salt Lake, pools of evaporating seawater like the San Francisco Salt Ponds, and the surfaces of salted meats and fish all have very high salt concentrations that extreme halophiles can survive.

In fact, the extreme pink color of some salt ponds, like those in San Francisco, is actually due to the pink pigments produced by the Archaea growing in the water. Extreme halophiles, like Halobacterium and Natronobacterium, are only able to thrive in these high-salt environments.

One note here: Archaea in this group are able to survive salt-based food preservation methods like used with meats and fish. But no pathogenic Archaea have been discovered yet, so you are not going to get sick from consuming these organisms. As is the case in science, this could change at any time. But it seems that Archaea did not evolve to cause disease in mammals.

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