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Zymogen | Definition, Activation & Granules

Randen Patterson, Darla Reed
  • Author
    Randen Patterson

    Randen Patterson has a PhD in Biochemistry and Molecular Biology from The University of Maryland School of Medicine. Dr. Patterson has 20 years of experience in biochemistry, cell biology, systems biology, evolution, and biophysics. Dr. Patterson has published more than 50 manuscripts in peer-reviewed journals.

  • Instructor
    Darla Reed

    Darla has taught undergraduate Enzyme Kinetics and has a doctorate in Basic Medical Science

Understand what a zymogen is in biology with examples. Learn about the zymogen activation, zymogen granules, and pepsinogen activation after secretion. Updated: 11/21/2023
Frequently Asked Questions

What are zymogens in biology?

Zymogens are proenzymes (i.e., inactive enzymes). Any protein that contains an inactive enzyme or protein until a portion of the protein is removed can be considered a zymogen.

Which enzymes are secreted as zymogens?

In general, destructive catalytic enzymes are secreted as zymogens. They do this so that they do not destroy the cell producing them (e.g., proteases, lipases, pore-forming subunits, etc.)

Which cells have zymogen granules?

Zymogen granules are primarily found in pancreatic acinar cells and salivary glands within the mouth. Both cells package catabolic enzymes as zymogens in these granules for secretion in response to hormonal signals.

What is the function of zymogen?

The function of a zymogen is to keep the enzyme contained within it inactive. As zymogens are generally catabolic, this keeps the enzyme from destroying the cell producing it. Once secreted from the cell, the zymogen is cleaved, creating the active enzyme.

A zymogen also termed a proenzyme, is a dormant enzyme activated when a portion of the protein is cleaved, either chemically/or enzymatically. Zymogens contain enzymes that, when active, have a wide variety of functions, including proteolysis, lipolysis, receptor ligands (i.e., hormones), protease inhibition, pore-formation in membranes, blood coagulation, and others. Zymogens are found in all living organisms, and many zymogens regulate their own active form (i.e., creating a feedback loop).

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  • 0:04 What Is a Zymogen?
  • 2:04 Zymogen Activation
  • 3:07 Zymogen Granules
  • 5:21 Lesson Summary

Zymogen activation is the process by which a proenzyme is converted into its active form. A protease activates most zymogens via proteolysis (i.e., the zymogen protein is cleaved). Proteases bind to specific protein sequences and then cleave the amino-acid backbone of the target protein. In the case of zymogens, this cleavage allows the protein to adopt a new conformation (i.e., structure), which is now capable of enzymatic activity.

What are zymogen cells? As with everything in the body, the secretion of gastric enzymes by the pancreas is tightly regulated and highly specific (i.e., the enzymes that are needed by the small intestine are the ones that are secreted). This process is accomplished by zymogen granules in pancreatic acinar cells. Zymogen granules are vesicles created by the Golgi apparatus in cells. Vesicles in the Golgi are packaged with zymogens and released as pre-granules through a mechanism that has yet to be fully elucidated. Pre-granules can fuse to form mature zymogen granules. The vesicles are curated during the maturation process for the cargo (i.e., zymogens) they contain.

Exactly how the cargo of zymogen granules is curated remains unknown. However, zymogen vesicles contain a wide variety of proteins in their membranes; these include ion channels, vesicle trafficking proteins, proteases, small GTPases, and others which allow the vesicle to be filled with the correct cargo and transported to the plasma membrane. The zymogen granules create a pool of readily-releasable vesicles at the plasma membrane. When the acinar cells receive hormonal messages from the small intestine, the zymogen granules undergo exocytosis and fuse with the plasma membrane, releasing the zymogens into the bile.

Pepsinogen is the zymogen for the proteolytic enzyme pepsin. Pepsin is an endopeptidase that breaks down proteins into smaller and smaller peptides. Pepsin is an important protease in the stomach as it has a preference for cleaving at aromatic amino acids. Unlike trypsinogen, pepsinogen is not directly activated by another protease; it needs a little help from a few protons. Pepsinogen is manufactured by chief cells, which then secrete it into the stomach. Once in the stomach, the low pH (i.e., a high level of free protons) in the stomach initiates a conformational change in the structure of pepsinogen, exposing a pepsin cleavage site. Active pepsin that is already present in the stomach cleaves pepsinogen to create a new pepsin enzyme. This process is a prime example of zymogen activation by the active enzyme it produces.


Transmission electron micrograph of a pancreatic acinar cell containing zymogen granules (black spheres in the picture).

Transmission electron micrograph of a pancreatic acinar cell containing zymogen granules.


Zymogens are proteins that contain an inactive enzyme (i.e., a proenzyme). Zymogens are an important part of physiology as they enable the production of inactive enzymes within the cell that are not activated until after they are secreted. Many zymogens are catabolic enzymes that degrade proteins, lipids, and sugars, and they would damage the cell manufacturing them if they were produced as active enzymes. Proenzymes within zymogens are activated by cleaving the zymogen, releasing the active enzyme.

Zymogen granules in secretory cells, such as acinar cells in the pancreas, are vesicles containing zymogens ready for release. Upon hormonal stimulation of the acinar cells, zymogen granules fuse with the plasma membrane and are released into the extracellular fluid, in this case, bile, and transported to the small intestine for processing into active enzymes. Studies to determine the full composition of zymogen granules and the mechanisms by which zymogen granules are packaged are ongoing.

Video Transcript

What Is a Zymogen?

Have you ever eaten a candy bar? Can you just pop it in your mouth? No, because first you have to remove the wrapper.

A zymogen is like a wrapped candy bar. In order to get to the good stuff, you need to tear away what's keeping you from it. Zymogens, or proenzymes, are enzymes that aren't functioning yet because their action is blocked by a ''wrapper.'' The ''wrapper'' can be a link between two amino acids, the building blocks of proteins, like a piece of string keeping a box closed. Or it can be an extra section of protein, like a jar lid.

But what are enzymes? Enzymes are proteins that help chemical reactions happen faster via special places called active sites. Imagine you want to make a fruit smoothie. You could hand-mush the fruit or put the fruit in a blender. The blender is like an enzyme; the active site is like the blades of the blender. The fruit becomes a fruit smoothie faster in the blender than if you squish it by hand.

Enzymes help make many things in the cell, but they can also unmake them. Enzymes that chop up proteins are called proteases. When cells make enzymes, especially proteases, they often make them as zymogen, an inactive form of the enzyme. This is so they don't go crazy and are only used when needed. Imagine your reaction if your blender suddenly hopped about on the counter, out of control, spewing half-chopped fruit everywhere. The counter would be a mess, and so would the cell.

Zymogens also ensure the enzyme folds properly (has the correct 3-D form), is stable in unfavorable environments, and goes to the proper place so it functions where it's supposed to.

You can recognize most zymogens by their name. Enzymes that begin with ''pro-'' or end with ''-gen'' are often the zymogen form. For example, prothrombin is the zymogen form of thrombin, an enzyme involved in blood clotting. Pepsinogen is the zymogen form of pepsin, the enzyme found in your stomach that helps digest food.

Zymogen Activation

Zymogens are activated by snipping the bonds between two or more amino acids, rather like cutting a balloon string so that it floats away. When the bonds are cut, the enzyme changes its conformation, its 3-D structure, so that the active site is free and able to become active. Upon activation, sometimes pieces of the protein completely leave the enzyme, like taking the wrapper off a candy bar. Other times, the pieces of protein fold in and become part of the enzyme, like a catapult being pulled back.

Zymogens can be activated by proteases that cut the amino acid bonds. They can also be activated by the environment and become autocatalytic. Autocatalysis is self-activation and happens when something in the environment allows the zymogen to cut its own chemical bonds. Pepsinogen, for example, does not become pepsin until the pH is around 2 to 3. The extra hydrogens found in the lower pH make the molecule cut its own bonds that are preventing it from functioning as a digestive enzyme.

Zymogen Granules

Inside the cells of your pancreas and salivary glands are proteases that can activate digestive enzymes. To make sure the proteases inside the cell can't change into the zymogen form before they are released into your digestive system, the cell uses special holding rooms called granules.

Zymogen granules are places in the cell that keep zymogens safe from the proteases inside the cell. They are like little rooms, or little bubbles, full of different types of zymogens. They are mostly found in acinar cells found in the pancreas and salivary glands that group together like the bumps on a raspberry.

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